Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-dependent oxidoreductase | VAR608DRAFT_RS00705 | Not Available | Negative | 145840 - 146433 | 20834.3 |
| copd family protein | VAR608DRAFT_RS00710 | Not Available | Negative | 146454 - 146918 | 16627.2 |
| tripartite tricarboxylate transporter substrate binding protein | VAR608DRAFT_RS00715 | Not Available | Negative | 146950 - 147930 | 34070.3 |
| group ii intron reverse transcriptase/maturase | VAR608DRAFT_RS00720 | Not Available | Positive | 148334 - 149842 | 57539.8 |
| cupin domain-containing protein | VAR608DRAFT_RS00725 | Not Available | Negative | 149948 - 150304 | 13124.7 |
| zinc-binding alcohol dehydrogenase family protein | VAR608DRAFT_RS00730 | Not Available | Negative | 150324 - 151313 | 34927.8 |
| 3-keto-5-aminohexanoate cleavage protein | VAR608DRAFT_RS00735 | Not Available | Negative | 151387 - 152274 | 32051.0 |
| sdr family nad(p)-dependent oxidoreductase | VAR608DRAFT_RS00740 | Not Available | Negative | 152354 - 153118 | 25971.2 |
| dioxygenase | VAR608DRAFT_RS00745 | Not Available | Negative | 153143 - 154009 | 31538.4 |
| laci family dna-binding transcriptional regulator | VAR608DRAFT_RS00750 | Not Available | Positive | 154145 - 155173 | 37016.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
