Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoacetate--coa ligase | VAR608DRAFT_RS00510 | Not Available | Positive | 107000 - 109024 | 74020.2 |
| ybay family lipoprotein | VAR608DRAFT_RS00515 | Not Available | Positive | 109021 - 109455 | 15803.4 |
| lysr substrate-binding domain-containing protein | VAR608DRAFT_RS00520 | Not Available | Negative | 109511 - 110398 | 32552.2 |
| is1634 family transposase | VAR608DRAFT_RS00525 | Not Available | Positive | 110550 - 112289 | 63873.0 |
| transketolase-like tk c-terminal-containing protein | VAR608DRAFT_RS36590 | Not Available | Positive | 112370 - 112531 | 5678.76 |
| d-2-hydroxyacid dehydrogenase | VAR608DRAFT_RS00530 | Not Available | Positive | 112544 - 113509 | 34972.3 |
| phage holin family protein | VAR608DRAFT_RS00535 | Not Available | Negative | 113521 - 113922 | 14421.3 |
| merr family transcriptional regulator | VAR608DRAFT_RS00540 | Not Available | Positive | 114037 - 114543 | 19070.1 |
| mfs transporter | VAR608DRAFT_RS00545 | Not Available | Positive | 114540 - 116105 | 56001.3 |
| hypothetical protein | VAR608DRAFT_RS00550 | Not Available | Negative | 116102 - 116410 | 11130.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
