Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding periplasmic protein | VAR608DRAFT_RS05960 | Not Available | Positive | 1302242 - 1303072 | 29748.8 |
| substrate-binding periplasmic protein | VAR608DRAFT_RS05965 | Not Available | Positive | 1303191 - 1304006 | 29255.3 |
| l-idonate 5-dehydrogenase | VAR608DRAFT_RS05970 | Not Available | Positive | 1304015 - 1305052 | 36355.9 |
| amino acid abc transporter permease | VAR608DRAFT_RS05975 | Not Available | Positive | 1305062 - 1305727 | 24259.5 |
| amino acid abc transporter permease | VAR608DRAFT_RS05980 | Not Available | Positive | 1305890 - 1306549 | 24408.6 |
| amino acid abc transporter atp-binding protein | VAR608DRAFT_RS05985 | Not Available | Positive | 1306609 - 1307340 | 26581.4 |
| d-mannonate dehydratase mand | VAR608DRAFT_RS05990 | Not Available | Positive | 1307369 - 1308580 | 45169.8 |
| tripartite tricarboxylate transporter substrate binding protein | VAR608DRAFT_RS05995 | Not Available | Negative | 1308587 - 1309588 | 34463.6 |
| dihydrodipicolinate synthase family protein | VAR608DRAFT_RS06000 | Not Available | Positive | 1309730 - 1310662 | 33742.9 |
| hpch/hpai aldolase/citrate lyase family protein | VAR608DRAFT_RS06005 | Not Available | Positive | 1310659 - 1311522 | 29960.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
