Vogesella sp. LIG4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chromobacteriaceae

Genus

Vogesella

Description

Vogesella sp. LIG4 is characterized by having a single replicon, which is noteworthy as it contributes to the understanding of its genomic structure and stability. The strain is cataloged under the accession number NZ_LT607802.1, which allows for its identification and retrieval from genomic databases. Although specific traits beyond the number of replicons and accession details are not provided, the classification of Vogesella sp. suggests it belongs to a genus within the family Comamonadaceae. Members of this family are typically found in freshwater environments and are known for their role in the degradation of organic compounds, which can be crucial for nutrient cycling in aquatic ecosystems. The presence of Vogesella sp. LIG4 in such environments may indicate its potential utility in bioremediation processes, where microorganisms break down pollutants. Furthermore, the single replicon could suggest a streamlined genome that may enhance its adaptability and efficiency in utilizing available resources in its habitat. Thus, Vogesella sp. LIG4 could play a significant role in maintaining ecological balance and supporting ecosystem functions, particularly in freshwater systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChromobacteriaceae
GenusVogesella
SpeciesVogesella sp. LIG4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vogesella sp. LIG4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vogesella sp. LIG4 chromosome I.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protocatechuate 4,5-dioxygenase subunit alphaPSELUDRAFT_RS02685Not AvailableNegative579211 - 57955512475.0
lysr family transcriptional regulatorPSELUDRAFT_RS02690Not AvailablePositive579642 - 58055934121.6
aldo/keto reductasePSELUDRAFT_RS02695Not AvailableNegative580852 - 58185335627.8
gfo/idh/moca family oxidoreductasePSELUDRAFT_RS02700Not AvailableNegative581865 - 58282734788.7
class iii extradiol dioxygenase subunit betaPSELUDRAFT_RS02705Not AvailableNegative582858 - 58372731772.9
protocatechuate 4,5-dioxygenase subunit alphaPSELUDRAFT_RS02710Not AvailableNegative583727 - 58417916776.8
amidohydrolase family proteinPSELUDRAFT_RS02715Not AvailableNegative584183 - 58510334755.4
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylasePSELUDRAFT_RS02720Not AvailableNegative585162 - 58585724486.9
amidohydrolase family proteinPSELUDRAFT_RS02725Not AvailableNegative585868 - 58689338254.6
mfs transporterPSELUDRAFT_RS02730Not AvailableNegative586984 - 58833647553.3

Displaying genes 551 – 560 of 3904 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.