Vogesella sp. LIG4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chromobacteriaceae

Genus

Vogesella

Description

Vogesella sp. LIG4 is characterized by having a single replicon, which is noteworthy as it contributes to the understanding of its genomic structure and stability. The strain is cataloged under the accession number NZ_LT607802.1, which allows for its identification and retrieval from genomic databases. Although specific traits beyond the number of replicons and accession details are not provided, the classification of Vogesella sp. suggests it belongs to a genus within the family Comamonadaceae. Members of this family are typically found in freshwater environments and are known for their role in the degradation of organic compounds, which can be crucial for nutrient cycling in aquatic ecosystems. The presence of Vogesella sp. LIG4 in such environments may indicate its potential utility in bioremediation processes, where microorganisms break down pollutants. Furthermore, the single replicon could suggest a streamlined genome that may enhance its adaptability and efficiency in utilizing available resources in its habitat. Thus, Vogesella sp. LIG4 could play a significant role in maintaining ecological balance and supporting ecosystem functions, particularly in freshwater systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChromobacteriaceae
GenusVogesella
SpeciesVogesella sp. LIG4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vogesella sp. LIG4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vogesella sp. LIG4 chromosome I.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ivb secretion system protein icmh/dotuPSELUDRAFT_RS02595Not AvailableNegative554560 - 55526426649.1
type vi secretion system baseplate subunit tsskPSELUDRAFT_RS02600Not AvailableNegative555272 - 55661849796.0
type vi secretion system lipoprotein tssjPSELUDRAFT_RS02605Not AvailableNegative556685 - 55722119301.1
m15 family metallopeptidasePSELUDRAFT_RS02610Not AvailablePositive557386 - 55825831647.1
type vi secretion system membrane subunit tssmPSELUDRAFT_RS02615Not AvailablePositive558267 - 562244144633.0
type vi secretion system-associated protein tagfPSELUDRAFT_RS02620Not AvailablePositive562259 - 56327837000.2
type vi secretion system contractile sheath small subunitPSELUDRAFT_RS02625Not AvailablePositive563322 - 56383419332.1
type vi secretion system contractile sheath large subunitPSELUDRAFT_RS02630Not AvailablePositive563838 - 56532254334.1
hcp family type vi secretion system effectorPSELUDRAFT_RS02635Not AvailablePositive565418 - 56591517811.9
ompa family proteinPSELUDRAFT_RS02640Not AvailablePositive565977 - 56646216960.7

Displaying genes 531 – 540 of 3904 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.