Micromonospora chokoriensis strain DSM 45160

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora chokoriensis strain DSM 45160 is a noteworthy actinobacterium primarily isolated from sandy and marine soils. This strain exhibits the presence of true flagella, which is characteristic of its motility and adaptation to its environment. The genomic characteristics of this strain include a single replicon, indicating a streamlined genetic structure that can be advantageous for its survival in diverse habitats. The strain is cataloged under the accession NZ_LT607409.1, providing a reference point for further research and exploration. The habitat of sandy and marine soils suggests that M. chokoriensis may play a role in the nutrient cycling and microbial dynamics of these environments. Such habitats often harbor a unique microbiome, and the presence of M. chokoriensis could indicate its potential contributions to soil health and the degradation of organic matter. Overall, the traits observed in Micromonospora chokoriensis strain DSM 45160 highlight its adaptability to specific ecological niches, as well as its potential role in maintaining the balance of microbial communities in sandy and marine ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora chokoriensis
Strainstrain DSM 45160

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsandy and marine soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora chokoriensis strain DSM 45160 chromosome I.

Gene Summary

Adenine Count

984238 bp

Thymine Count

984547 bp

Guanine Count

2465929 bp

Cytosine Count

2463005 bp

Genome Length

6897819 bp

Protein-coding Genes

6211 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein phosphatase 2c domain-containing proteinGA0070612_RS20030Not AvailablePositive4349986 - 435080428621.5
cellulose binding domain-containing proteinGA0070612_RS20035Not AvailableNegative4350897 - 435211441681.8
paax family transcriptional regulator c-terminal domain-containing proteinGA0070612_RS20040Not AvailableNegative4352284 - 435322834514.6
ycxb family proteinGA0070612_RS20045Not AvailablePositive4353314 - 435381118269.2
hypothetical proteinGA0070612_RS20050Not AvailableNegative4353816 - 435428316385.4
rna polymerase sigma factorGA0070612_RS20055Not AvailableNegative4354280 - 435479819494.6
nad(p)/fad-dependent oxidoreductaseGA0070612_RS20060Not AvailableNegative4354917 - 435647658145.2
hypothetical proteinGA0070612_RS20065Not AvailablePositive4356652 - 435787845619.7
ribokinaseGA0070612_RS20070Not AvailablePositive4358102 - 435867420979.0
hypothetical proteinGA0070612_RS20075Not AvailablePositive4358714 - 435912714544.2

Displaying genes 4021 – 4030 of 6275 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.