Micromonospora chokoriensis strain DSM 45160

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora chokoriensis strain DSM 45160 is a noteworthy actinobacterium primarily isolated from sandy and marine soils. This strain exhibits the presence of true flagella, which is characteristic of its motility and adaptation to its environment. The genomic characteristics of this strain include a single replicon, indicating a streamlined genetic structure that can be advantageous for its survival in diverse habitats. The strain is cataloged under the accession NZ_LT607409.1, providing a reference point for further research and exploration. The habitat of sandy and marine soils suggests that M. chokoriensis may play a role in the nutrient cycling and microbial dynamics of these environments. Such habitats often harbor a unique microbiome, and the presence of M. chokoriensis could indicate its potential contributions to soil health and the degradation of organic matter. Overall, the traits observed in Micromonospora chokoriensis strain DSM 45160 highlight its adaptability to specific ecological niches, as well as its potential role in maintaining the balance of microbial communities in sandy and marine ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora chokoriensis
Strainstrain DSM 45160

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsandy and marine soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora chokoriensis strain DSM 45160 chromosome I.

Gene Summary

Adenine Count

984238 bp

Thymine Count

984547 bp

Guanine Count

2465929 bp

Cytosine Count

2463005 bp

Genome Length

6897819 bp

Protein-coding Genes

6211 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class i sam-dependent methyltransferaseGA0070612_RS19535Not AvailableNegative4243641 - 424449231339.2
class i sam-dependent methyltransferaseGA0070612_RS19540Not AvailableNegative4244492 - 424534031783.9
lipopolysaccharide biosynthesis proteinGA0070612_RS19545Not AvailableNegative4245337 - 424690253662.7
sugar transferaseGA0070612_RS19550Not AvailableNegative4246895 - 424777633039.0
nad-dependent epimerase/dehydratase family proteinGA0070612_RS19555Not AvailablePositive4248163 - 424923037679.8
discoidin domain-containing proteinGA0070612_RS19560Not AvailablePositive4249341 - 425172884563.8
hypothetical proteinGA0070612_RS19565Not AvailablePositive4252185 - 425330341299.1
toll/interleukin-1 receptor domain-containing proteinGA0070612_RS19570Not AvailablePositive4253791 - 425561168445.2
hd domain-containing proteinGA0070612_RS19575Not AvailablePositive4255702 - 425625620460.2
nudix domain-containing proteinGA0070612_RS19580Not AvailableNegative4256244 - 425671417509.6

Displaying genes 3921 – 3930 of 6275 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.