Micromonospora chokoriensis strain DSM 45160

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora chokoriensis strain DSM 45160 is a noteworthy actinobacterium primarily isolated from sandy and marine soils. This strain exhibits the presence of true flagella, which is characteristic of its motility and adaptation to its environment. The genomic characteristics of this strain include a single replicon, indicating a streamlined genetic structure that can be advantageous for its survival in diverse habitats. The strain is cataloged under the accession NZ_LT607409.1, providing a reference point for further research and exploration. The habitat of sandy and marine soils suggests that M. chokoriensis may play a role in the nutrient cycling and microbial dynamics of these environments. Such habitats often harbor a unique microbiome, and the presence of M. chokoriensis could indicate its potential contributions to soil health and the degradation of organic matter. Overall, the traits observed in Micromonospora chokoriensis strain DSM 45160 highlight its adaptability to specific ecological niches, as well as its potential role in maintaining the balance of microbial communities in sandy and marine ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora chokoriensis
Strainstrain DSM 45160

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsandy and marine soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora chokoriensis strain DSM 45160 chromosome I.

Gene Summary

Adenine Count

984238 bp

Thymine Count

984547 bp

Guanine Count

2465929 bp

Cytosine Count

2463005 bp

Genome Length

6897819 bp

Protein-coding Genes

6211 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ubiquinol-cytochrome c reductase iron-sulfur subunitGA0070612_RS14330Not AvailablePositive3020996 - 302208439736.5
ubiquinol-cytochrome c reductase cytochrome b subunitGA0070612_RS14335Not AvailablePositive3022081 - 302371259883.6
duf4142 domain-containing proteinGA0070612_RS14340Not AvailablePositive3023906 - 302459223336.0
lrp/asnc family transcriptional regulatorGA0070612_RS14345Not AvailableNegative3024673 - 302496010020.0
ndp-sugar synthaseGA0070612_RS14350Not AvailableNegative3024992 - 302589730893.9
nudix hydrolaseGA0070612_RS14355Not AvailableNegative3025894 - 302643619683.0
rela/spot family proteinGA0070612_RS14360Not AvailableNegative3026490 - 302828666134.8
dedd exonuclease domain-containing proteinGA0070612_RS14365Not AvailableNegative3028414 - 303016862584.0
nyn domain-containing proteinGA0070612_RS14370Not AvailablePositive3030296 - 303175051889.5
hypothetical proteinGA0070612_RS14375Not AvailablePositive3031987 - 30322057518.99

Displaying genes 2881 – 2890 of 6275 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.