Micromonospora chokoriensis strain DSM 45160

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora chokoriensis strain DSM 45160 is a noteworthy actinobacterium primarily isolated from sandy and marine soils. This strain exhibits the presence of true flagella, which is characteristic of its motility and adaptation to its environment. The genomic characteristics of this strain include a single replicon, indicating a streamlined genetic structure that can be advantageous for its survival in diverse habitats. The strain is cataloged under the accession NZ_LT607409.1, providing a reference point for further research and exploration. The habitat of sandy and marine soils suggests that M. chokoriensis may play a role in the nutrient cycling and microbial dynamics of these environments. Such habitats often harbor a unique microbiome, and the presence of M. chokoriensis could indicate its potential contributions to soil health and the degradation of organic matter. Overall, the traits observed in Micromonospora chokoriensis strain DSM 45160 highlight its adaptability to specific ecological niches, as well as its potential role in maintaining the balance of microbial communities in sandy and marine ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora chokoriensis
Strainstrain DSM 45160

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsandy and marine soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora chokoriensis strain DSM 45160 chromosome I.

Gene Summary

Adenine Count

984238 bp

Thymine Count

984547 bp

Guanine Count

2465929 bp

Cytosine Count

2463005 bp

Genome Length

6897819 bp

Protein-coding Genes

6211 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulator transcription factorGA0070612_RS08700Not AvailablePositive1848031 - 184871425134.4
hypothetical proteinGA0070612_RS08705Not AvailableNegative1849404 - 185020129489.5
ppx/gppa phosphatase family proteinGA0070612_RS08710Not AvailablePositive1850282 - 185122633370.4
sugar phosphate isomerase/epimerase family proteinGA0070612_RS08715Not AvailablePositive1851302 - 185210828687.9
cgnr zinc finger domain-containing proteinGA0070612_RS08720Not AvailableNegative1852133 - 185272021521.0
glutathionylspermidine synthase family proteinGA0070612_RS08725Not AvailableNegative1852740 - 185390643745.3
hypothetical proteinGA0070612_RS08730Not AvailableNegative1853908 - 18541809019.6
proline dehydrogenase family proteinGA0070612_RS08735Not AvailablePositive1854266 - 185518633943.5
alpha/beta fold hydrolaseGA0070612_RS08740Not AvailablePositive1855288 - 185608828599.6
tetr/acrr family transcriptional regulatorGA0070612_RS08745Not AvailablePositive1856081 - 185665620217.9

Displaying genes 1761 – 1770 of 6275 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.