Micromonospora chokoriensis strain DSM 45160

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora chokoriensis strain DSM 45160 is a noteworthy actinobacterium primarily isolated from sandy and marine soils. This strain exhibits the presence of true flagella, which is characteristic of its motility and adaptation to its environment. The genomic characteristics of this strain include a single replicon, indicating a streamlined genetic structure that can be advantageous for its survival in diverse habitats. The strain is cataloged under the accession NZ_LT607409.1, providing a reference point for further research and exploration. The habitat of sandy and marine soils suggests that M. chokoriensis may play a role in the nutrient cycling and microbial dynamics of these environments. Such habitats often harbor a unique microbiome, and the presence of M. chokoriensis could indicate its potential contributions to soil health and the degradation of organic matter. Overall, the traits observed in Micromonospora chokoriensis strain DSM 45160 highlight its adaptability to specific ecological niches, as well as its potential role in maintaining the balance of microbial communities in sandy and marine ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora chokoriensis
Strainstrain DSM 45160

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsandy and marine soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora chokoriensis strain DSM 45160 chromosome I.

Gene Summary

Adenine Count

984238 bp

Thymine Count

984547 bp

Guanine Count

2465929 bp

Cytosine Count

2463005 bp

Genome Length

6897819 bp

Protein-coding Genes

6211 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette domain-containing proteinGA0070612_RS08165Not AvailablePositive1735562 - 173655135465.2
abc transporter permeaseGA0070612_RS08170Not AvailablePositive1736548 - 173733328361.6
apc family permeaseGA0070612_RS08175Not AvailableNegative1737312 - 173857742634.3
phosphatase pap2 family proteinGA0070612_RS08180Not AvailableNegative1738589 - 173932627004.5
duf4032 domain-containing proteinGA0070612_RS08185Not AvailablePositive1739459 - 174067045892.7
n-acetylglucosamine-6-phosphate deacetylaseGA0070612_RS08190Not AvailableNegative1741326 - 174243538319.7
rok family proteinGA0070612_RS08195Not AvailableNegative1742432 - 174340632501.9
sis domain-containing proteinGA0070612_RS08200Not AvailableNegative1743403 - 174433232641.8
deor/glpr family dna-binding transcription regulatorGA0070612_RS08205Not AvailablePositive1744533 - 174531827398.1
atp-binding cassette domain-containing proteinGA0070612_RS08210Not AvailablePositive1745527 - 174645032236.2

Displaying genes 1651 – 1660 of 6275 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.