Micromonospora narathiwatensis strain DSM 45248

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora narathiwatensis strain DSM 45248 is a soil-dwelling actinobacterium characterized by the presence of flagella, which facilitates its motility in its natural habitat. This strain has a single replicon, indicating a streamlined genomic structure that is often associated with efficient replication and stability. The strain is cataloged under the accession number NZ_LT594324.1, which serves as a reference for genetic and genomic studies. This taxonomic classification helps in understanding the organism's phylogenetic relationships and ecological roles within soil ecosystems. Micromonospora species are known for their significant ecological functions, particularly in soil environments where they contribute to the degradation of organic materials and nutrient cycling. Their motile nature, supported by flagella, may enhance their ability to colonize various niches within the soil matrix, allowing them to exploit diverse substrates. In summary, Micromonospora narathiwatensis strain DSM 45248 presents key traits such as soil habitat, flagella presence, and a single replicon. These characteristics emphasize its role in soil microbiomes, where it likely participates in vital ecological processes such as organic matter decomposition and nutrient availability. Understanding such traits can provide insights into the functional dynamics of soil microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora narathiwatensis
Strainstrain DSM 45248

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora narathiwatensis strain DSM 45248 chromosome I.

Gene Summary

Adenine Count

902897 bp

Thymine Count

909653 bp

Guanine Count

2399269 bp

Cytosine Count

2400138 bp

Genome Length

6612057 bp

Protein-coding Genes

5844 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cellulase family glycosylhydrolaseGA0070621_RS02495Not AvailablePositive561675 - 56306948972.9
rna polymerase sigma factorGA0070621_RS02500Not AvailableNegative563174 - 56442445010.9
ycii family proteinGA0070621_RS02505Not AvailableNegative564428 - 56482013935.7
polysaccharide deacetylase family proteinGA0070621_RS02510Not AvailableNegative565064 - 56606234205.1
rna polymerase sigma factorGA0070621_RS02515Not AvailablePositive566486 - 56716024655.6
cu044_5270 family proteinGA0070621_RS02520Not AvailablePositive567157 - 56809833005.0
alpha-galactosidaseGA0070621_RS02525Not AvailableNegative568105 - 57037581632.8
carbohydrate abc transporter permeaseGA0070621_RS02530Not AvailableNegative570372 - 57128033807.6
carbohydrate abc transporter permeaseGA0070621_RS02535Not AvailableNegative571277 - 57223334878.3
abc transporter substrate-binding proteinGA0070621_RS02540Not AvailableNegative572256 - 57358447684.3

Displaying genes 501 – 510 of 5914 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.