Micromonospora narathiwatensis strain DSM 45248

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora narathiwatensis strain DSM 45248 is a soil-dwelling actinobacterium characterized by the presence of flagella, which facilitates its motility in its natural habitat. This strain has a single replicon, indicating a streamlined genomic structure that is often associated with efficient replication and stability. The strain is cataloged under the accession number NZ_LT594324.1, which serves as a reference for genetic and genomic studies. This taxonomic classification helps in understanding the organism's phylogenetic relationships and ecological roles within soil ecosystems. Micromonospora species are known for their significant ecological functions, particularly in soil environments where they contribute to the degradation of organic materials and nutrient cycling. Their motile nature, supported by flagella, may enhance their ability to colonize various niches within the soil matrix, allowing them to exploit diverse substrates. In summary, Micromonospora narathiwatensis strain DSM 45248 presents key traits such as soil habitat, flagella presence, and a single replicon. These characteristics emphasize its role in soil microbiomes, where it likely participates in vital ecological processes such as organic matter decomposition and nutrient availability. Understanding such traits can provide insights into the functional dynamics of soil microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora narathiwatensis
Strainstrain DSM 45248

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora narathiwatensis strain DSM 45248 chromosome I.

Gene Summary

Adenine Count

902897 bp

Thymine Count

909653 bp

Guanine Count

2399269 bp

Cytosine Count

2400138 bp

Genome Length

6612057 bp

Protein-coding Genes

5844 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-deoxy-d-xylulose-5-phosphate reductoisomeraseGA0070621_RS01100Not AvailablePositive246076 - 24728742415.8
m50 family metallopeptidaseGA0070621_RS01105Not AvailablePositive247287 - 24853444264.0
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseGA0070621_RS01110Not AvailablePositive248544 - 24971640721.5
winged helix-turn-helix transcriptional regulatorGA0070621_RS01115Not AvailableNegative249783 - 25046925470.7
class i sam-dependent methyltransferaseGA0070621_RS01120Not AvailablePositive250600 - 25142129333.0
padr family transcriptional regulatorGA0070621_RS01125Not AvailableNegative251482 - 25206921541.4
mfs transporterGA0070621_RS01130Not AvailablePositive252192 - 25341841771.1
duf4081 domain-containing gnat family n-acetyltransferaseGA0070621_RS01135Not AvailablePositive253507 - 25434630366.6
atp-binding cassette domain-containing proteinGA0070621_RS01140Not AvailablePositive254467 - 25521326029.2
yhge/pip family proteinGA0070621_RS01145Not AvailablePositive255210 - 25736074205.0

Displaying genes 221 – 230 of 5914 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.