Planktothrix rubescens NIVA-CYA 18 strain PCC 7821

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Microcoleaceae

Genus

Planktothrix

Description

Planktothrix rubescens NIVA-CYA 18 strain PCC 7821 is characterized by having two replicons, which is significant for its genetic stability and adaptability in various environments. The strain is cataloged under two accessions: NZ_LR812491.1 and NZ_LR812493.1. These accessions provide a reference for researchers studying this cyanobacterial strain, allowing for comparisons and analyses of genetic diversity. Planktothrix rubescens is known for its role in freshwater ecosystems, particularly in the formation of blooms that can impact water quality and aquatic life. Its ability to thrive in different nutrient conditions can lead to significant ecological consequences, such as oxygen depletion and the production of toxins, which can affect fish and other aquatic organisms. The structural and genetic traits of this strain are crucial for understanding its ecological role and the potential risks it poses in freshwater environments. Given its ability to form dense populations, P. rubescens can alter the dynamics of nutrient cycling and energy flow in aquatic ecosystems. This highlights the importance of monitoring and studying such strains to manage their impact effectively, especially in light of increasing eutrophication in water bodies globally.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyMicrocoleaceae
GenusPlanktothrix
SpeciesPlanktothrix rubescens
StrainNIVA-CYA 18 strain PCC 7821

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Planktothrix rubescens NIVA-CYA 18 strain PCC 7821
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planktothrix rubescens NIVA-CYA 18 strain PCC 7821 plasmid pII,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

18 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
has-barrel domain-containing proteinPLAN_RS11260Not AvailableNegative90502 - 9116724988.9
nad(p)h dehydrogenase subunit ndhsPLAN_RS11265Not AvailableNegative91240 - 914377174.68
duf29 domain-containing proteinPLAN_RS11270Not AvailablePositive92356 - 9282618145.6
duf2281 domain-containing proteinPLAN_RS11275Not AvailablePositive92927 - 931789298.01
type ii toxin-antitoxin system vapc family toxinPLAN_RS11280Not AvailablePositive93182 - 9360415931.5
bifunctional folylpolyglutamate synthase/dihydrofolate synthasePLAN_RS11285Not AvailablePositive93610 - 9485745981.1
sh3 domain-containing proteinPLAN_RS11290Not AvailableNegative94959 - 9561223282.9
phenylalanine--trna ligase subunit alphaPLAN_RS11295Not AvailableNegative95651 - 9665237524.8
5'/3'-nucleotidase surePLAN_RS11300Not AvailablePositive96706 - 9751229566.4
translation initiation factor if-3PLAN_RS11305Not AvailableNegative97639 - 9817220661.3

Displaying genes 101 – 110 of 2902 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.