Yersinia enterocolitica subsp. enterocolitica strain NCTC12982

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia enterocolitica subsp. enterocolitica strain NCTC12982 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism and heterotrophic energy source. This strain typically resides in various habitats, indicating its adaptability to different environments. It is noteworthy for its motility, facilitated by the presence of flagella, which enables movement in its surroundings. The optimal growth temperature for this strain is 28°C, and it falls within the mesophilic temperature range. Y. enterocolitica subsp. enterocolitica NCTC12982 has a single replicon and is structured with two membranes, a characteristic feature of Gram-negative bacteria. It exists as single cells rather than forming clusters, which may influence its ecological interactions. As a free-living organism, this bacterium can thrive independently in its environment, exhibiting a diverse range of ecological relationships. Its ability to adapt to various habitats and utilize different nutrients highlights its ecological significance. The presence of this strain in populated and agricultural areas raises considerations about its role in food safety and public health, particularly given its association with gastrointestinal diseases in humans. Overall, Yersinia enterocolitica subsp. enterocolitica strain NCTC12982 exemplifies the complexity and adaptability of microorganisms in diverse ecological contexts. For further genomic information, this strain is cataloged under the accession number NZ_LR590469.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia enterocolitica
Strainsubsp. enterocolitica strain NCTC12982

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Yersinia enterocolitica subsp. enterocolitica strain NCTC12982
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Yersinia enterocolitica subsp. enterocolitica strain NCTC12982

Gene Summary

Adenine Count

1202811 bp

Thymine Count

1200768 bp

Guanine Count

1080725 bp

Cytosine Count

1074105 bp

Genome Length

4558409 bp

Protein-coding Genes

3883 genes

Non-Coding Genes

309 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Variable tail fiber proteinFGL26_RS21625Not AvailablePositive1204883 - 12050776947.96
Tail fiber assembly proteinFGL26_RS05620Not AvailablePositive1205077 - 120569122991.4
type ii toxin-antitoxin system vapb family antitoxinFGL26_RS05625Not AvailablePositive1206173 - 12064068979.42
type ii toxin-antitoxin system trna(fmet)-specific endonuclease vapcFGL26_RS05630Not AvailablePositive1206406 - 120681014908.1
TransposaseFGL26_RS21405Not AvailablePositive1207420 - 12075966614.92
Predicted transposaseFGL26_RS05635Not AvailablePositive1207802 - 120868633358.6
TransposaseFGL26_RS05640Not AvailableNegative1208946 - 120974729118.4
Dna-binding hu proteinFGL26_RS05645Not AvailableNegative1209968 - 121026411186.4
Endolysin proteinFGL26_RS06030Not AvailableNegative1286973 - 128745517703.2
Holin proteinFGL26_RS06035Not AvailableNegative1287457 - 12876336658.24

Displaying genes 21 – 30 of 4192 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.