Helicobacter cholecystus strain NCTC13205

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter cholecystus strain NCTC13205 is characterized by having a single replicon, which is a significant feature in its genetic organization. This strain has been assigned the GenBank accession number NZ_LR134518.1, providing a reference for researchers interested in its genomic data. Helicobacter cholecystus is part of the Helicobacter genus, which is known for its role in various gastrointestinal diseases. The existence of a single replicon may indicate a streamlined genetic structure, potentially affecting its replication and gene expression mechanisms. In terms of ecological insight, the presence of Helicobacter cholecystus in specific environments, such as the gallbladders of certain mammals, suggests a niche adaptation that may relate to its pathogenicity and the host's health. The relationship between this bacterium and its host could provide important insights into gallbladder health and the microbial ecology of the gastrointestinal tract. Further studies focusing on this strain could enhance our understanding of its role within the broader context of Helicobacter species and their interactions with mammalian hosts.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter cholecystus
Strainstrain NCTC13205

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter cholecystus strain NCTC13205
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter cholecystus strain NCTC13205


Gene Summary

Adenine Count

464251 bp

Thymine Count

456370 bp

Guanine Count

253274 bp

Cytosine Count

246366 bp

Genome Length

1420261 bp

Protein-coding Genes

1315 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeEL253_RS00260Not AvailablePositive49167 - 5051650412.6
pdc sensor domain-containing proteinEL253_RS00265Not AvailablePositive51361 - 5228434807.5
pimelyl-acp methyl ester esterase biovEL253_RS00270Not AvailableNegative52253 - 5277420149.6
aaa family atpaseEL253_RS00275Not AvailableNegative52761 - 5435660163.4
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabEL253_RS00280Not AvailableNegative54353 - 5560647371.0
mechanosensitive ion channel domain-containing proteinEL253_RS00285Not AvailableNegative55621 - 5721061179.2
3-dehydroquinate synthaseEL253_RS00290Not AvailableNegative57207 - 5814534971.5
potassium transporter trkaEL253_RS00295Not AvailableNegative58207 - 5961653846.8
trna guanosine(34) transglycosylase tgtEL253_RS00300Not AvailablePositive59689 - 6084043453.9
diaminopimelate epimeraseEL253_RS00305Not AvailableNegative61014 - 6178728867.3

Displaying genes 51 – 60 of 1363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.