Helicobacter cholecystus strain NCTC13205

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter cholecystus strain NCTC13205 is characterized by having a single replicon, which is a significant feature in its genetic organization. This strain has been assigned the GenBank accession number NZ_LR134518.1, providing a reference for researchers interested in its genomic data. Helicobacter cholecystus is part of the Helicobacter genus, which is known for its role in various gastrointestinal diseases. The existence of a single replicon may indicate a streamlined genetic structure, potentially affecting its replication and gene expression mechanisms. In terms of ecological insight, the presence of Helicobacter cholecystus in specific environments, such as the gallbladders of certain mammals, suggests a niche adaptation that may relate to its pathogenicity and the host's health. The relationship between this bacterium and its host could provide important insights into gallbladder health and the microbial ecology of the gastrointestinal tract. Further studies focusing on this strain could enhance our understanding of its role within the broader context of Helicobacter species and their interactions with mammalian hosts.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter cholecystus
Strainstrain NCTC13205

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter cholecystus strain NCTC13205
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter cholecystus strain NCTC13205 chromosome 1, complete

Gene Summary

Adenine Count

464251 bp

Thymine Count

456370 bp

Guanine Count

253274 bp

Cytosine Count

246366 bp

Genome Length

1420261 bp

Protein-coding Genes

1315 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudaminic acid cytidylyltransferaseEL253_RS01800Not AvailablePositive372598 - 37328425886.1
bifunctional udp-2,4-diacetamido-2,4,6-trideoxy-beta-l-altropyranose hydrolase/gnat family n-acetyltransferaseEL253_RS01805Not AvailablePositive373274 - 37455148246.4
pseudaminic acid synthaseEL253_RS01810Not AvailablePositive374548 - 37554937104.7
degt/dnrj/eryc1/strs family aminotransferaseEL253_RS01815Not AvailableNegative375542 - 37665141084.5
superoxide dismutaseEL253_RS01820Not AvailableNegative376748 - 37737424054.5
trna pseudouridine(13) synthase trudEL253_RS01825Not AvailablePositive377496 - 37859042098.5
gtp cyclohydrolase i foleEL253_RS01830Not AvailablePositive378583 - 37912820990.8
dj-1 family glyoxalase iiiEL253_RS01835Not AvailableNegative379125 - 37967620107.0
elongation factor pEL253_RS01840Not AvailableNegative379676 - 38023920861.1
class ii fructose-bisphosphate aldolaseEL253_RS01845Not AvailableNegative380256 - 38117933432.2

Displaying genes 361 – 370 of 1363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.