Helicobacter cholecystus strain NCTC13205

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter cholecystus strain NCTC13205 is characterized by having a single replicon, which is a significant feature in its genetic organization. This strain has been assigned the GenBank accession number NZ_LR134518.1, providing a reference for researchers interested in its genomic data. Helicobacter cholecystus is part of the Helicobacter genus, which is known for its role in various gastrointestinal diseases. The existence of a single replicon may indicate a streamlined genetic structure, potentially affecting its replication and gene expression mechanisms. In terms of ecological insight, the presence of Helicobacter cholecystus in specific environments, such as the gallbladders of certain mammals, suggests a niche adaptation that may relate to its pathogenicity and the host's health. The relationship between this bacterium and its host could provide important insights into gallbladder health and the microbial ecology of the gastrointestinal tract. Further studies focusing on this strain could enhance our understanding of its role within the broader context of Helicobacter species and their interactions with mammalian hosts.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter cholecystus
Strainstrain NCTC13205

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter cholecystus strain NCTC13205
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter cholecystus strain NCTC13205 chromosome 1, complete

Gene Summary

Adenine Count

464251 bp

Thymine Count

456370 bp

Guanine Count

253274 bp

Cytosine Count

246366 bp

Genome Length

1420261 bp

Protein-coding Genes

1315 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
riboflavin synthaseEL253_RS01750Not AvailablePositive364104 - 36471222667.6
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinEL253_RS01755Not AvailablePositive364715 - 3649819757.78
duf302 domain-containing proteinEL253_RS01760Not AvailableNegative365001 - 36542616176.8
conjugal transfer protein trafEL253_RS01765Not AvailableNegative365451 - 36659641642.0
aminotransferase class v-fold plp-dependent enzymeEL253_RS01770Not AvailableNegative366589 - 36791148728.9
hypothetical proteinEL253_RS01775Not AvailablePositive367991 - 36835914610.2
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbEL253_RS01780Not AvailableNegative368356 - 36977752790.3
ompp1/fadl family transporterEL253_RS01785Not AvailableNegative369846 - 37134854169.3
gatb/yqey domain-containing proteinEL253_RS01790Not AvailableNegative371396 - 37183916385.9
flagellar basal body l-ring protein flghEL253_RS01795Not AvailablePositive371907 - 37261426499.1

Displaying genes 351 – 360 of 1363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.