Helicobacter cholecystus strain NCTC13205

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter cholecystus strain NCTC13205 is characterized by having a single replicon, which is a significant feature in its genetic organization. This strain has been assigned the GenBank accession number NZ_LR134518.1, providing a reference for researchers interested in its genomic data. Helicobacter cholecystus is part of the Helicobacter genus, which is known for its role in various gastrointestinal diseases. The existence of a single replicon may indicate a streamlined genetic structure, potentially affecting its replication and gene expression mechanisms. In terms of ecological insight, the presence of Helicobacter cholecystus in specific environments, such as the gallbladders of certain mammals, suggests a niche adaptation that may relate to its pathogenicity and the host's health. The relationship between this bacterium and its host could provide important insights into gallbladder health and the microbial ecology of the gastrointestinal tract. Further studies focusing on this strain could enhance our understanding of its role within the broader context of Helicobacter species and their interactions with mammalian hosts.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter cholecystus
Strainstrain NCTC13205

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter cholecystus strain NCTC13205
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter cholecystus strain NCTC13205 chromosome 1, complete

Gene Summary

Adenine Count

464251 bp

Thymine Count

456370 bp

Guanine Count

253274 bp

Cytosine Count

246366 bp

Genome Length

1420261 bp

Protein-coding Genes

1315 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate flavodoxin oxidoreductase subunit gammaEL253_RS01105Not AvailablePositive243395 - 24395520713.4
4fe-4s dicluster domain-containing proteinEL253_RS01110Not AvailablePositive243967 - 24435614703.4
2-oxoacid:ferredoxin oxidoreductase subunit alphaEL253_RS01115Not AvailablePositive244369 - 24558344418.2
thiamine pyrophosphate-dependent enzymeEL253_RS01120Not AvailablePositive245594 - 24653835193.9
phosphomannomutase/phosphoglucomutaseEL253_RS01125Not AvailableNegative246849 - 24823452101.8
flagellar basal-body ms-ring/collar protein flifEL253_RS01130Not AvailablePositive248372 - 25009964046.4
flagellar motor switch protein fligEL253_RS01135Not AvailablePositive250110 - 25114137967.8
flih/sctl family proteinEL253_RS01140Not AvailablePositive251141 - 25192629322.8
1-deoxy-d-xylulose-5-phosphate synthaseEL253_RS01145Not AvailablePositive251926 - 25377067895.7
low molecular weight protein-tyrosine-phosphataseEL253_RS01150Not AvailablePositive253767 - 25420116399.9

Displaying genes 221 – 230 of 1363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.