Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s8 family serine peptidase | EL161_RS22470 | Not Available | Negative | 1089912 - 1093205 | 117353.0 |
| mipa/ompv family protein | EL161_RS04785 | Not Available | Positive | 1093477 - 1094319 | 31957.8 |
| duf3019 domain-containing protein | EL161_RS04790 | Not Available | Positive | 1094309 - 1094728 | 15801.1 |
| response regulator transcription factor | EL161_RS04795 | Not Available | Positive | 1094725 - 1095441 | 26772.4 |
| atp-binding protein | EL161_RS04800 | Not Available | Positive | 1095453 - 1096682 | 46934.8 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | EL161_RS04805 | Not Available | Negative | 1096697 - 1097851 | 42645.0 |
| fad-dependent oxidoreductase | EL161_RS04810 | Not Available | Negative | 1098031 - 1099206 | 43440.4 |
| hydroperoxide resistance transcriptional regulator ohrr | EL161_RS04815 | Not Available | Negative | 1099287 - 1099784 | 18303.2 |
| organic hydroperoxide resistance protein | EL161_RS04820 | Not Available | Positive | 1099913 - 1100338 | 14450.2 |
| cytochrome c biosynthesis protein | EL161_RS04825 | Not Available | Positive | 1100565 - 1101989 | 50885.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

