Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system ywqk family antitoxin | EL161_RS04735 | Not Available | Positive | 1069962 - 1071695 | 66865.5 |
| toxin-antitoxin system ywqk family antitoxin | EL161_RS04740 | Not Available | Positive | 1071856 - 1074165 | 88273.2 |
| rhomboid family intramembrane serine protease | EL161_RS04745 | Not Available | Negative | 1074253 - 1075815 | 59101.6 |
| d-alanyl-d-alanine endopeptidase | EL161_RS04750 | Not Available | Negative | 1076005 - 1076961 | 34935.4 |
| lysine--trna ligase | EL161_RS04755 | Not Available | Negative | 1077337 - 1078839 | 57050.3 |
| peptide chain release factor 2 | EL161_RS04760 | Not Available | Negative | 1078869 - 1079967 | 41341.2 |
| formate dehydrogenase subunit alpha | EL161_RS04765 | Not Available | Positive | 1080495 - 1084793 | 155629.0 |
| methyl-accepting chemotaxis protein | EL161_RS04770 | Not Available | Negative | 1084913 - 1086577 | 59921.6 |
| chromate efflux transporter | EL161_RS04775 | Not Available | Negative | 1086713 - 1087864 | 40633.1 |
| ig-like domain-containing protein | EL161_RS22465 | Not Available | Negative | 1088048 - 1089943 | 68079.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

