Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EL161_RS04680 | Not Available | Negative | 1054580 - 1055560 | 34990.0 |
| histidine phosphatase family protein | EL161_RS04685 | Not Available | Negative | 1056033 - 1056755 | 26387.4 |
| methionine synthase | EL161_RS04690 | Not Available | Positive | 1056966 - 1060700 | 138173.0 |
| hypothetical protein | EL161_RS04695 | Not Available | Negative | 1061344 - 1062060 | 27809.3 |
| is66 family insertion sequence element accessory protein tnpa | EL161_RS04700 | Not Available | Positive | 1062182 - 1062481 | 11455.5 |
| is66 family insertion sequence element accessory protein tnpb | EL161_RS04705 | Not Available | Positive | 1062478 - 1062822 | 13155.0 |
| is66 family transposase | EL161_RS04710 | Not Available | Positive | 1062909 - 1064411 | 56033.1 |
| bro-n domain-containing protein | EL161_RS04715 | Not Available | Negative | 1064567 - 1065343 | 29220.1 |
| dienelactone hydrolase family protein | EL161_RS04725 | Not Available | Negative | 1066430 - 1067392 | 35010.4 |
| hypothetical protein | EL161_RS04730 | Not Available | Positive | 1067664 - 1069952 | 85141.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

