Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EL161_RS04575 | Not Available | Negative | 1036265 - 1037569 | 48972.1 |
| abc transporter atp-binding protein | EL161_RS04580 | Not Available | Negative | 1037578 - 1038318 | 27013.3 |
| hypothetical protein | EL161_RS04585 | Not Available | Negative | 1038419 - 1038790 | 13343.5 |
| efflux rnd transporter periplasmic adaptor subunit | EL161_RS04590 | Not Available | Negative | 1038790 - 1040052 | 45963.2 |
| dihydroorotase | EL161_RS04595 | Not Available | Positive | 1040423 - 1041454 | 37818.1 |
| hypothetical protein | EL161_RS04600 | Not Available | Positive | 1041592 - 1042638 | 39349.2 |
| nuclear transport factor 2 family protein | EL161_RS04605 | Not Available | Positive | 1042797 - 1043153 | 13304.9 |
| duf3144 domain-containing protein | EL161_RS04610 | Not Available | Positive | 1043410 - 1043703 | 11637.5 |
| hypothetical protein | EL161_RS04615 | Not Available | Negative | 1043860 - 1044084 | 8417.02 |
| mapeg family protein | EL161_RS04625 | Not Available | Negative | 1044788 - 1045171 | 13793.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

