Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemin abc transporter substrate-binding protein | EL161_RS04475 | Not Available | Positive | 1018969 - 1019892 | 32869.7 |
| iron abc transporter permease | EL161_RS04480 | Not Available | Positive | 1019910 - 1020926 | 35317.5 |
| heme abc transporter atp-binding protein | EL161_RS04485 | Not Available | Positive | 1020938 - 1021756 | 29732.2 |
| duf2956 domain-containing protein | EL161_RS04490 | Not Available | Positive | 1021839 - 1022180 | 12644.2 |
| hypothetical protein | EL161_RS04495 | Not Available | Negative | 1022177 - 1022542 | 13841.7 |
| nad(p)/fad-dependent oxidoreductase | EL161_RS04500 | Not Available | Negative | 1022625 - 1024100 | 53920.9 |
| winged helix-turn-helix domain-containing protein | EL161_RS04505 | Not Available | Negative | 1024097 - 1024432 | 12385.8 |
| duf924 family protein | EL161_RS04510 | Not Available | Positive | 1024631 - 1025182 | 21235.4 |
| transporter substrate-binding domain-containing protein | EL161_RS04515 | Not Available | Positive | 1025366 - 1026163 | 30174.4 |
| universal stress protein | EL161_RS04520 | Not Available | Negative | 1026167 - 1026604 | 15796.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

