Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l21 | EL161_RS04375 | Not Available | Negative | 997407 - 997718 | 11363.9 |
| octaprenyl diphosphate synthase | EL161_RS04380 | Not Available | Positive | 997992 - 998963 | 35288.1 |
| uracil-dna glycosylase | EL161_RS04385 | Not Available | Negative | 999040 - 999699 | 24559.5 |
| hypothetical protein | EL161_RS04390 | Not Available | Negative | 999999 - 1000433 | 16723.7 |
| duf3144 domain-containing protein | EL161_RS04395 | Not Available | Positive | 1000830 - 1001147 | 11444.2 |
| lyse family translocator | EL161_RS04400 | Not Available | Negative | 1001253 - 1001867 | 21418.3 |
| s10 family peptidase | EL161_RS04405 | Not Available | Negative | 1001954 - 1003504 | 57675.0 |
| thioredoxin family protein | EL161_RS04410 | Not Available | Positive | 1003708 - 1004253 | 19505.0 |
| sigma-54 interaction domain-containing protein | EL161_RS04415 | Not Available | Positive | 1004765 - 1006231 | 54586.4 |
| cytochrome c oxidase accessory protein ccog | EL161_RS04420 | Not Available | Positive | 1006391 - 1007821 | 54275.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

