Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EL161_RS22620 | Not Available | Negative | 60138 - 60260 | 4601.88 |
| duf2063 domain-containing protein | EL161_RS00275 | Not Available | Negative | 60417 - 61157 | 28134.6 |
| duf692 domain-containing protein | EL161_RS00280 | Not Available | Negative | 61157 - 61996 | 31649.8 |
| hypothetical protein | EL161_RS00285 | Not Available | Negative | 62131 - 62562 | 14540.5 |
| pp_00056 | EL161_RS00290 | Not Available | Positive | 62822 - 63769 | Not Available |
| trar/dksa c4-type zinc finger protein | EL161_RS00295 | Not Available | Positive | 63933 - 64292 | 13651.1 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase usha | EL161_RS00300 | Not Available | Negative | 64419 - 66170 | 63211.6 |
| alpha/beta hydrolase | EL161_RS00305 | Not Available | Negative | 66535 - 67200 | 23693.8 |
| duf3389 domain-containing protein | EL161_RS00310 | Not Available | Negative | 67253 - 67480 | 8255.13 |
| m1 family metallopeptidase | EL161_RS00315 | Not Available | Positive | 67867 - 69795 | 72305.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

