Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | EL161_RS04270 | Not Available | Positive | 977712 - 978746 | 39235.0 |
| cell envelope integrity protein tola | EL161_RS04280 | Not Available | Negative | 979254 - 979622 | 13652.6 |
| d-2-hydroxyacid dehydrogenase | EL161_RS04285 | Not Available | Negative | 979640 - 980596 | 33838.8 |
| outer membrane beta-barrel protein | EL161_RS04290 | Not Available | Negative | 980642 - 981286 | 23530.7 |
| co-chaperone djla | EL161_RS04295 | Not Available | Negative | 981342 - 982130 | 29719.8 |
| n-acetylmuramate alpha-1-phosphate uridylyltransferase muru | EL161_RS04300 | Not Available | Negative | 982220 - 982888 | 23571.7 |
| phosphotransferase | EL161_RS04305 | Not Available | Negative | 982888 - 983976 | 41044.4 |
| lps assembly protein lptd | EL161_RS04310 | Not Available | Positive | 984092 - 986389 | 87404.4 |
| peptidylprolyl isomerase sura | EL161_RS04315 | Not Available | Positive | 986609 - 987913 | 48975.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EL161_RS04320 | Not Available | Positive | 987920 - 988906 | 35327.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

