Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | EL161_RS04210 | Not Available | Negative | 964494 - 965981 | 55288.1 |
| formate-dependent phosphoribosylglycinamide formyltransferase | EL161_RS04215 | Not Available | Positive | 966198 - 967373 | 42222.0 |
| duf3142 domain-containing protein | EL161_RS04220 | Not Available | Positive | 967611 - 969089 | 54669.6 |
| tetratricopeptide repeat protein | EL161_RS04225 | Not Available | Positive | 969079 - 971376 | 85563.2 |
| hypothetical protein | EL161_RS04230 | Not Available | Positive | 971562 - 972008 | 16841.0 |
| transposase | EL161_RS04235 | Not Available | Positive | 972248 - 973225 | 37742.8 |
| rhs repeat domain-containing protein | EL161_RS22460 | Not Available | Positive | 973562 - 974950 | 50737.0 |
| abc transporter atp-binding protein | EL161_RS04250 | Not Available | Positive | 974971 - 975393 | 15535.4 |
| hypothetical protein | EL161_RS04255 | Not Available | Negative | 976083 - 976796 | 26584.1 |
| is200/is605 family transposase | EL161_RS04260 | Not Available | Negative | 977195 - 977407 | 7843.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

