Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| no-inducible flavohemoprotein | EL161_RS04110 | Not Available | Positive | 947157 - 948350 | 43577.2 |
| pseudouridine synthase | EL161_RS04115 | Not Available | Negative | 948448 - 949173 | 27040.8 |
| helix-turn-helix transcriptional regulator | EL161_RS04120 | Not Available | Negative | 949188 - 949808 | 23390.1 |
| is200/is605 family transposase | EL161_RS04125 | Not Available | Positive | 949955 - 950568 | 22059.2 |
| voc family protein | EL161_RS04130 | Not Available | Positive | 950619 - 951035 | 16011.7 |
| ycxb family protein | EL161_RS04135 | Not Available | Positive | 951181 - 951651 | 17810.6 |
| acetate uptake transporter | EL161_RS04140 | Not Available | Negative | 951725 - 952294 | 20375.5 |
| hypothetical protein | EL161_RS04145 | Not Available | Positive | 953046 - 953282 | 8558.12 |
| mipa/ompv family protein | EL161_RS04150 | Not Available | Positive | 953629 - 954492 | 33338.3 |
| duf3019 domain-containing protein | EL161_RS04155 | Not Available | Positive | 954519 - 954911 | 14690.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

