Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m16 family metallopeptidase | EL161_RS04015 | Not Available | Negative | 922836 - 925685 | 104222.0 |
| yqaa family protein | EL161_RS04020 | Not Available | Negative | 925827 - 926252 | 15159.1 |
| dicarboxylate/amino acid:cation symporter | EL161_RS04025 | Not Available | Positive | 926540 - 927793 | 43875.2 |
| hypothetical protein | EL161_RS22285 | Not Available | Positive | 927952 - 928119 | 6203.31 |
| sodium ion-translocating decarboxylase subunit beta | EL161_RS04030 | Not Available | Negative | 928168 - 929298 | 38996.3 |
| sodium-extruding oxaloacetate decarboxylase subunit alpha | EL161_RS04035 | Not Available | Negative | 929307 - 931142 | 66922.8 |
| oadg family protein | EL161_RS04040 | Not Available | Negative | 931154 - 931366 | 7485.32 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 932005 - 932120 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 932295 - 935188 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 935495 - 937037 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

