Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EL161_RS03965 | Not Available | Negative | 911227 - 911949 | 26647.8 |
| sigma-70 family rna polymerase sigma factor | EL161_RS03970 | Not Available | Negative | 911942 - 912544 | 22970.4 |
| vwa domain-containing protein | EL161_RS03975 | Not Available | Negative | 912589 - 914463 | 68342.8 |
| c4-dicarboxylic acid transporter daua | EL161_RS03980 | Not Available | Positive | 914689 - 916455 | 62287.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EL161_RS03985 | Not Available | Positive | 916715 - 917206 | 16960.8 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EL161_RS03990 | Not Available | Positive | 917206 - 918303 | 40753.2 |
| sensor domain-containing diguanylate cyclase | EL161_RS03995 | Not Available | Positive | 918458 - 919720 | 47858.0 |
| hypothetical protein | EL161_RS04000 | Not Available | Negative | 919768 - 920385 | 23719.9 |
| hypothetical protein | EL161_RS04005 | Not Available | Negative | 920542 - 921003 | 17034.1 |
| glutamate--cysteine ligase | EL161_RS04010 | Not Available | Negative | 921003 - 922652 | 61795.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

