Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | EL161_RS03915 | Not Available | Negative | 898717 - 899013 | 11406.0 |
| m28 family metallopeptidase | EL161_RS03920 | Not Available | Positive | 899149 - 900555 | 49522.1 |
| peroxide stress protein yaaa | EL161_RS03925 | Not Available | Negative | 900627 - 901400 | 29035.8 |
| alanine/glycine:cation symporter family protein | EL161_RS03930 | Not Available | Negative | 901509 - 902975 | 52196.5 |
| phosphoketolase family protein | EL161_RS03935 | Not Available | Positive | 903409 - 905778 | 89200.3 |
| ompa family protein | EL161_RS03940 | Not Available | Positive | 906019 - 907137 | 40491.1 |
| transaldolase | EL161_RS03945 | Not Available | Positive | 907386 - 908342 | 34926.8 |
| glucose-6-phosphate isomerase | EL161_RS03950 | Not Available | Positive | 908363 - 910000 | 59588.3 |
| duf3545 family protein | EL161_RS03955 | Not Available | Positive | 910217 - 910402 | 7362.67 |
| hemerythrin domain-containing protein | EL161_RS03960 | Not Available | Negative | 910470 - 911006 | 20741.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

