Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilx n-terminal domain-containing pilus assembly protein | EL161_RS03865 | Not Available | Negative | 888571 - 889047 | 16510.1 |
| pilw family protein | EL161_RS03870 | Not Available | Negative | 889052 - 890050 | 36753.8 |
| type iv pilus modification protein pilv | EL161_RS03875 | Not Available | Negative | 890051 - 890602 | 20180.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EL161_RS03880 | Not Available | Negative | 890819 - 891775 | 34775.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EL161_RS03885 | Not Available | Negative | 891777 - 892199 | 14868.6 |
| signal peptidase ii | EL161_RS03890 | Not Available | Negative | 892199 - 892711 | 19647.8 |
| isoleucine--trna ligase | EL161_RS03895 | Not Available | Negative | 892721 - 895543 | 105615.0 |
| bifunctional riboflavin kinase/fad synthetase | EL161_RS03900 | Not Available | Negative | 895576 - 896511 | 34534.7 |
| murein biosynthesis integral membrane protein murj | EL161_RS03905 | Not Available | Negative | 896577 - 898136 | 56646.2 |
| 30s ribosomal protein s20 | EL161_RS03910 | Not Available | Positive | 898389 - 898655 | 9702.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

