Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EL161_RS03815 | Not Available | Negative | 875580 - 878204 | 94684.3 |
| laci family dna-binding transcriptional regulator | EL161_RS03820 | Not Available | Positive | 878631 - 879647 | 37015.2 |
| nad(p)/fad-dependent oxidoreductase | EL161_RS03825 | Not Available | Negative | 879708 - 880997 | 47207.5 |
| nitrogen regulatory protein p-ii | EL161_RS03830 | Not Available | Negative | 881190 - 881528 | 12576.3 |
| gsph/fimt family pseudopilin | EL161_RS03835 | Not Available | Positive | 881767 - 882279 | 18551.1 |
| gsph/fimt family pseudopilin | EL161_RS03840 | Not Available | Positive | 882432 - 882914 | 16605.9 |
| is256-like element issod5 family transposase | EL161_RS03845 | Not Available | Positive | 882983 - 884188 | 45407.7 |
| tapy2 family type iva secretion system protein | EL161_RS03850 | Not Available | Negative | 884245 - 884544 | 11435.0 |
| type iv pilin protein | EL161_RS03855 | Not Available | Negative | 884541 - 884939 | 14058.9 |
| pilus assembly protein | EL161_RS03860 | Not Available | Negative | 884948 - 888574 | 129251.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

