Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | EL161_RS03710 | Not Available | Positive | 850767 - 852074 | 47804.8 |
| duf2937 family protein | EL161_RS03715 | Not Available | Negative | 852119 - 852631 | 19670.9 |
| sulfurtransferase | EL161_RS03720 | Not Available | Negative | 852716 - 853573 | 31230.1 |
| septal ring lytic transglycosylase rlpa family protein | EL161_RS03725 | Not Available | Negative | 853718 - 854083 | 12984.5 |
| aldehyde dehydrogenase | EL161_RS03730 | Not Available | Negative | 854276 - 855772 | 53077.9 |
| aspartate aminotransferase family protein | EL161_RS03735 | Not Available | Positive | 856053 - 857393 | 48641.0 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | EL161_RS03740 | Not Available | Positive | 857445 - 858935 | 53736.1 |
| cupin domain-containing protein | EL161_RS03745 | Not Available | Positive | 858953 - 859318 | 13664.1 |
| torf family putative porin | EL161_RS03750 | Not Available | Positive | 859504 - 860226 | 26343.5 |
| n-acetylglucosamine mfs transporter nagp | EL161_RS03755 | Not Available | Negative | 860291 - 861589 | 46139.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

