Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate--2-oxoglutarate transaminase | EL161_RS03660 | Not Available | Negative | 838278 - 839555 | 44716.1 |
| nadp-dependent succinate-semialdehyde dehydrogenase | EL161_RS03665 | Not Available | Negative | 839658 - 841106 | 51229.9 |
| nad(p)/fad-dependent oxidoreductase | EL161_RS03670 | Not Available | Negative | 841163 - 842449 | 46413.7 |
| abc transporter permease subunit | EL161_RS03675 | Not Available | Negative | 842745 - 843560 | 30076.7 |
| abc transporter permease subunit | EL161_RS03680 | Not Available | Negative | 843557 - 844462 | 33879.6 |
| polyamine abc transporter atp-binding protein | EL161_RS03685 | Not Available | Negative | 844459 - 845595 | 42476.3 |
| polyamine abc transporter substrate-binding protein | EL161_RS03690 | Not Available | Negative | 845755 - 846855 | 40515.3 |
| glutamine synthetase family protein | EL161_RS03695 | Not Available | Negative | 847473 - 848828 | 50405.1 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | EL161_RS03700 | Not Available | Negative | 848830 - 849591 | 27235.4 |
| cupin domain-containing protein | EL161_RS03705 | Not Available | Negative | 849984 - 850532 | 20140.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

