Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate 1-o-acyltransferase plsy | EL161_RS03610 | Not Available | Positive | 825723 - 826334 | 21700.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | EL161_RS03615 | Not Available | Negative | 826427 - 827443 | 36191.6 |
| 30s ribosomal protein s21 | EL161_RS03620 | Not Available | Positive | 827658 - 827873 | 8345.34 |
| gatb/yqey domain-containing protein | EL161_RS03625 | Not Available | Positive | 827880 - 828323 | 15913.6 |
| dna primase | EL161_RS03630 | Not Available | Positive | 828407 - 830131 | 64994.1 |
| rna polymerase sigma factor rpod | EL161_RS03635 | Not Available | Positive | 830267 - 832117 | 70363.4 |
| Trna-met | Not Available | Not Available | Positive | 832407 - 832483 | Not Available |
| methyl-accepting chemotaxis protein | EL161_RS03645 | Not Available | Negative | 832711 - 834831 | 76411.1 |
| peptide mfs transporter | EL161_RS03650 | Not Available | Positive | 835249 - 836799 | 56468.9 |
| llm class flavin-dependent oxidoreductase | EL161_RS03655 | Not Available | Positive | 837167 - 838225 | 38485.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

