Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | EL161_RS03505 | Not Available | Negative | 798765 - 800915 | 80339.9 |
| prolyl oligopeptidase family serine peptidase | EL161_RS03510 | Not Available | Positive | 801226 - 803634 | 89645.3 |
| tonb-dependent receptor plug domain-containing protein | EL161_RS03515 | Not Available | Negative | 804315 - 807338 | 110313.0 |
| aquaporin z | EL161_RS03520 | Not Available | Positive | 808030 - 808725 | 23794.5 |
| duf2750 domain-containing protein | EL161_RS03525 | Not Available | Positive | 808882 - 809262 | 14567.0 |
| hypothetical protein | EL161_RS03530 | Not Available | Positive | 809282 - 809737 | 16664.4 |
| iron-sulfur cluster insertion protein erpa | EL161_RS03535 | Not Available | Negative | 809864 - 810214 | 12363.5 |
| duf6776 family protein | EL161_RS03540 | Not Available | Negative | 810207 - 811013 | 30389.6 |
| chloride channel protein | EL161_RS03545 | Not Available | Positive | 811088 - 812812 | 61968.2 |
| aspartate carbamoyltransferase | EL161_RS03550 | Not Available | Positive | 813004 - 814023 | 38045.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

