Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | EL161_RS03400 | Not Available | Negative | 774541 - 775347 | 30198.4 |
| sulfite exporter taue/safe family protein | EL161_RS03405 | Not Available | Negative | 775393 - 776193 | 27732.5 |
| phosphoenolpyruvate--protein phosphotransferase | EL161_RS03410 | Not Available | Negative | 776252 - 778486 | 81586.8 |
| rna pyrophosphohydrolase | EL161_RS03415 | Not Available | Negative | 778510 - 779034 | 20681.7 |
| dna mismatch repair endonuclease muth | EL161_RS03420 | Not Available | Positive | 779726 - 780397 | 24911.6 |
| adenylate/guanylate cyclase domain-containing protein | EL161_RS03425 | Not Available | Positive | 780521 - 781588 | 40372.4 |
| hydrogen peroxide-inducible genes transcriptional activator oxyr | EL161_RS03430 | Not Available | Negative | 781613 - 782524 | 33696.2 |
| hpt domain-containing protein | EL161_RS03435 | Not Available | Negative | 782742 - 783107 | 13258.9 |
| tigr01212 family radical sam protein | EL161_RS03440 | Not Available | Negative | 783293 - 784222 | 34153.1 |
| glutamate synthase large subunit | EL161_RS03450 | Not Available | Positive | 784809 - 789257 | 163073.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

