Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mucb/rseb c-terminal domain-containing protein | EL161_RS03350 | Not Available | Negative | 766210 - 767142 | 35002.4 |
| sigma-e factor negative regulatory protein | EL161_RS03355 | Not Available | Negative | 767155 - 767778 | 22289.3 |
| rna polymerase sigma factor rpoe | EL161_RS03360 | Not Available | Negative | 767805 - 768383 | 21969.2 |
| l-aspartate oxidase | EL161_RS03365 | Not Available | Positive | 768573 - 770186 | 59719.0 |
| protein ygfx | EL161_RS22455 | Not Available | Negative | 770315 - 770755 | 17142.0 |
| succinate dehydrogenase assembly factor 2 | EL161_RS03375 | Not Available | Negative | 770736 - 770984 | 9559.62 |
| transcriptional activator nhar | EL161_RS03380 | Not Available | Negative | 771067 - 771975 | 34250.5 |
| hypothetical protein | EL161_RS03385 | Not Available | Negative | 772071 - 772457 | 13829.7 |
| na+/h+ antiporter nhaa | EL161_RS03390 | Not Available | Negative | 772460 - 773629 | 40776.6 |
| thymidylate synthase | EL161_RS03395 | Not Available | Negative | 773747 - 774541 | 30100.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

