Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EL161_RS00170 | Not Available | Positive | 37005 - 37871 | 32467.4 |
| ggdef domain-containing protein | EL161_RS00175 | Not Available | Positive | 38066 - 39016 | 35622.9 |
| eama family transporter rard | EL161_RS00180 | Not Available | Negative | 39257 - 40156 | 33356.9 |
| lrp/asnc family transcriptional regulator | EL161_RS00185 | Not Available | Positive | 40266 - 40718 | 17235.0 |
| hypothetical protein | EL161_RS00190 | Not Available | Positive | 41320 - 41751 | 16098.2 |
| Trna-pro | Not Available | Not Available | Positive | 41991 - 42067 | Not Available |
| diguanylate cyclase | EL161_RS00200 | Not Available | Positive | 42433 - 44613 | 81955.6 |
| alpha/beta hydrolase | EL161_RS00205 | Not Available | Negative | 44610 - 46076 | 54347.2 |
| duf6942 family protein | EL161_RS00210 | Not Available | Positive | 46241 - 46762 | 19250.1 |
| ammonia-dependent nad(+) synthetase | EL161_RS00215 | Not Available | Negative | 46922 - 47752 | 30249.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

