Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid-cluster nad(p)-dependent oxidoreductase | EL161_RS03250 | Not Available | Negative | 746481 - 747593 | 40700.9 |
| hydroxylamine reductase | EL161_RS03255 | Not Available | Negative | 747674 - 749338 | 60330.8 |
| bifunctional chorismate mutase/prephenate dehydrogenase | EL161_RS03260 | Not Available | Negative | 749555 - 750694 | 42799.9 |
| 3-deoxy-7-phosphoheptulonate synthase | EL161_RS03265 | Not Available | Negative | 750758 - 751849 | 40047.8 |
| 50s ribosomal protein l19 | EL161_RS03270 | Not Available | Negative | 752246 - 752599 | 13293.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EL161_RS03275 | Not Available | Negative | 752634 - 753380 | 27489.8 |
| ribosome maturation factor rimm | EL161_RS03280 | Not Available | Negative | 753396 - 753926 | 19943.9 |
| 30s ribosomal protein s16 | EL161_RS03285 | Not Available | Negative | 753947 - 754195 | 9109.01 |
| signal recognition particle protein | EL161_RS03290 | Not Available | Negative | 754414 - 755787 | 49868.6 |
| inner membrane protein ypjd | EL161_RS03295 | Not Available | Positive | 756076 - 756864 | 28996.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

