Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptg | EL161_RS03155 | Not Available | Negative | 725346 - 726404 | 38968.6 |
| lps export abc transporter permease lptf | EL161_RS03160 | Not Available | Negative | 726401 - 727513 | 41226.4 |
| leucyl aminopeptidase | EL161_RS03165 | Not Available | Positive | 727769 - 729277 | 54712.0 |
| chorismate mutase | EL161_RS03170 | Not Available | Positive | 729610 - 731613 | 73538.3 |
| cation:proton antiporter | EL161_RS03175 | Not Available | Negative | 731762 - 732811 | 38122.9 |
| vrr-nuc domain-containing protein | EL161_RS03180 | Not Available | Negative | 733196 - 733849 | 24996.2 |
| hypothetical protein | EL161_RS03185 | Not Available | Negative | 733955 - 734278 | 12249.8 |
| hypothetical protein | EL161_RS03190 | Not Available | Negative | 734364 - 734873 | 18023.7 |
| yiix/yebb-like n1pc/p60 family cysteine hydrolase | EL161_RS03195 | Not Available | Negative | 735441 - 736142 | 26739.2 |
| superinfection immunity protein | EL161_RS03200 | Not Available | Negative | 736430 - 736840 | 15334.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

