Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribbon-helix-helix domain-containing protein | EL161_RS03105 | Not Available | Negative | 717602 - 717910 | 11408.8 |
| dj-1/pfpi family protein | EL161_RS03110 | Not Available | Negative | 718019 - 718579 | 19804.8 |
| flotillin family protein | EL161_RS03115 | Not Available | Negative | 718736 - 720514 | 65522.9 |
| yqij family protein | EL161_RS03120 | Not Available | Negative | 720548 - 721183 | 22891.2 |
| dsre family protein | EL161_RS03125 | Not Available | Negative | 721290 - 721856 | 19779.8 |
| carboxypeptidase m32 | EL161_RS03130 | Not Available | Positive | 721926 - 723431 | 55967.4 |
| gnat family n-acetyltransferase | EL161_RS03135 | Not Available | Positive | 723549 - 724043 | 18604.5 |
| dmt family protein | EL161_RS03140 | Not Available | Positive | 724043 - 724393 | 13253.6 |
| duf2960 domain-containing protein | EL161_RS03145 | Not Available | Positive | 724431 - 724688 | 9860.63 |
| rdd family protein | EL161_RS03150 | Not Available | Positive | 724728 - 725237 | 18886.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

