Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 18 protein | EL161_RS03055 | Not Available | Negative | 702448 - 705054 | 92120.0 |
| rok family protein | EL161_RS03060 | Not Available | Negative | 705730 - 706521 | 28471.4 |
| aminopeptidase p family protein | EL161_RS03065 | Not Available | Positive | 706884 - 708701 | 66076.6 |
| methyl-accepting chemotaxis protein | EL161_RS03070 | Not Available | Positive | 709177 - 710745 | 57679.0 |
| dead/deah box helicase | EL161_RS03075 | Not Available | Positive | 711053 - 712354 | 48165.6 |
| duf1254 domain-containing protein | EL161_RS03080 | Not Available | Negative | 712458 - 713753 | 48497.0 |
| hypothetical protein | EL161_RS03085 | Not Available | Negative | 713972 - 714862 | 33509.2 |
| peroxiredoxin-like family protein | EL161_RS03090 | Not Available | Positive | 715223 - 715870 | 23666.8 |
| duf2913 family protein | EL161_RS03095 | Not Available | Positive | 715999 - 716634 | 23774.7 |
| substrate-binding periplasmic protein | EL161_RS03100 | Not Available | Positive | 716753 - 717502 | 27975.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

