Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rcc1 domain-containing protein | EL161_RS03005 | Not Available | Negative | 693041 - 694639 | 58039.5 |
| duf368 domain-containing protein | EL161_RS03010 | Not Available | Negative | 694840 - 695754 | 32694.3 |
| hotdog fold domain-containing protein | EL161_RS03015 | Not Available | Positive | 695993 - 696487 | 18124.6 |
| nucleoside deaminase | EL161_RS03020 | Not Available | Positive | 696587 - 697024 | 15662.8 |
| duf418 domain-containing protein | EL161_RS03025 | Not Available | Positive | 697169 - 698413 | 46574.7 |
| duf1294 domain-containing protein | EL161_RS03030 | Not Available | Positive | 698391 - 698879 | 18136.7 |
| tetr/acrr family transcriptional regulator | EL161_RS03035 | Not Available | Negative | 698888 - 699496 | 22654.4 |
| hpp family protein | EL161_RS03040 | Not Available | Positive | 699749 - 700228 | 17034.6 |
| short-chain fatty acid transporter | EL161_RS03045 | Not Available | Negative | 700360 - 701688 | 47280.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EL161_RS03050 | Not Available | Positive | 701910 - 702380 | 17144.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

