Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit s | EL161_RS02855 | Not Available | Negative | 663253 - 664443 | 45210.4 |
| type i restriction-modification system subunit m | EL161_RS02860 | Not Available | Negative | 664440 - 666011 | 57806.7 |
| restriction endonuclease | EL161_RS02865 | Not Available | Negative | 666090 - 667025 | 34644.1 |
| sumf1/egtb/pvdo family nonheme iron enzyme | EL161_RS02870 | Not Available | Positive | 667529 - 669343 | 69747.0 |
| helix-turn-helix transcriptional regulator | EL161_RS02875 | Not Available | Negative | 669403 - 669603 | 7553.12 |
| radc family protein | EL161_RS02880 | Not Available | Positive | 670100 - 670576 | 17541.2 |
| hypothetical protein | EL161_RS02885 | Not Available | Positive | 670614 - 670976 | 13482.4 |
| type iv toxin-antitoxin system yeeu family antitoxin | EL161_RS02890 | Not Available | Positive | 671110 - 671484 | 13926.8 |
| duf2787 domain-containing protein | EL161_RS02895 | Not Available | Positive | 671700 - 672113 | 16017.9 |
| tyrosine-type recombinase/integrase | EL161_RS02900 | Not Available | Positive | 672255 - 672815 | 21668.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

