Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase family protein | EL161_RS00120 | Not Available | Positive | 27128 - 27643 | 18968.0 |
| voc family protein | EL161_RS00125 | Not Available | Positive | 27727 - 28335 | 22014.4 |
| duf5062 family protein | EL161_RS00130 | Not Available | Positive | 28572 - 28832 | 9951.3 |
| m23 family metallopeptidase | EL161_RS00135 | Not Available | Negative | 28903 - 29814 | 32373.9 |
| 6-pyruvoyl trahydropterin synthase family protein | EL161_RS00140 | Not Available | Negative | 29883 - 30758 | 32727.9 |
| cytochrome-c peroxidase | EL161_RS00145 | Not Available | Positive | 31342 - 32343 | 36207.6 |
| nucleoid-associated protein yejk | EL161_RS00150 | Not Available | Negative | 32481 - 33509 | 38226.9 |
| yejl family protein | EL161_RS00155 | Not Available | Positive | 33587 - 33805 | 7807.47 |
| duf3413 domain-containing protein | EL161_RS00160 | Not Available | Positive | 33872 - 35662 | 67191.5 |
| nadh:flavin oxidoreductase/nadh oxidase | EL161_RS00165 | Not Available | Negative | 35791 - 36903 | 40709.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

