Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase domain-containing protein | EL161_RS02800 | Not Available | Positive | 648003 - 649250 | 46997.9 |
| helix-turn-helix domain-containing protein | EL161_RS02805 | Not Available | Positive | 649579 - 649830 | 9541.53 |
| is200/is605 family transposase | EL161_RS02810 | Not Available | Positive | 649940 - 650155 | 8185.85 |
| dead/deah box helicase | EL161_RS02820 | Not Available | Negative | 650806 - 652566 | 66783.6 |
| hypothetical protein | EL161_RS02825 | Not Available | Negative | 652567 - 652950 | 14092.5 |
| hypothetical protein | EL161_RS02830 | Not Available | Negative | 652934 - 654220 | 49831.0 |
| hypothetical protein | EL161_RS02835 | Not Available | Negative | 654232 - 656181 | 69381.8 |
| aaa family atpase | EL161_RS02840 | Not Available | Negative | 656371 - 659016 | 98672.5 |
| hsdr family type i site-specific deoxyribonuclease | EL161_RS02845 | Not Available | Negative | 659075 - 662188 | 119247.0 |
| fic family protein | EL161_RS02850 | Not Available | Negative | 662252 - 663253 | 36487.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

