Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EL161_RS02750 | Not Available | Positive | 637482 - 639929 | 90509.0 |
| monovalent cation:proton antiporter-2 (cpa2) family protein | EL161_RS02755 | Not Available | Negative | 639998 - 641767 | 63404.1 |
| ggdef domain-containing protein | EL161_RS02760 | Not Available | Negative | 641991 - 643718 | 64712.6 |
| hypothetical protein | EL161_RS02765 | Not Available | Negative | 643782 - 643994 | 7838.15 |
| sam-dependent methyltransferase | EL161_RS02770 | Not Available | Negative | 644040 - 644831 | 29044.0 |
| outer membrane protein assembly factor bame | EL161_RS02775 | Not Available | Positive | 645235 - 645726 | 18572.2 |
| rnfh family protein | EL161_RS02780 | Not Available | Negative | 645802 - 646137 | 12350.0 |
| type ii toxin-antitoxin system rata family toxin | EL161_RS02785 | Not Available | Negative | 646127 - 646564 | 16376.8 |
| ssra-binding protein smpb | EL161_RS02790 | Not Available | Positive | 646818 - 647309 | 18702.1 |
| Tmrna,resume consensus sequence (at 84): tatagttgcaaacgacga | Not Available | Not Available | Positive | 647382 - 647736 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

