Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching protein glgb | EL161_RS02700 | Not Available | Negative | 623324 - 625561 | 85143.6 |
| 4-alpha-glucanotransferase | EL161_RS02705 | Not Available | Negative | 625579 - 627984 | 90067.9 |
| peptidylprolyl isomerase | EL161_RS02710 | Not Available | Positive | 628494 - 629129 | 22173.3 |
| marr family winged helix-turn-helix transcriptional regulator | EL161_RS02715 | Not Available | Negative | 629189 - 629665 | 17853.9 |
| l-threonine dehydrogenase | EL161_RS02720 | Not Available | Positive | 629993 - 631141 | 39975.4 |
| cytoplasmic protein | EL161_RS02725 | Not Available | Positive | 631836 - 632210 | 14417.9 |
| hypothetical protein | EL161_RS02730 | Not Available | Positive | 632538 - 632750 | 7437.04 |
| acyl-coa thioesterase | EL161_RS02735 | Not Available | Negative | 632788 - 633156 | 13369.3 |
| isocitrate lyase | EL161_RS02740 | Not Available | Negative | 633531 - 634853 | 48300.7 |
| malate synthase a | EL161_RS02745 | Not Available | Negative | 634997 - 636646 | 61763.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

